In April, Bouchard had said: "She's a cheater and I don't think a cheater in any sport should be allowed to play again."
But Sharapova told the BBC: "I think those are comments not based on facts, and therefore I don't take them into consideration."
The Russian player, who has just released her memoir Unstoppable, My Life So Far, also took aim at Andy Murray. The British player has previously said he finds it strange that there is a prescription drug - meldonium - used to treat a heart condition commonly shared by many athletes at the top of their sport.
Sharapova said: "I don't think it's for them to really have an opinion, because they don't have the facts. So, you know, I think that those are the types of words that make headlines and they will be used as headlines.
"But ultimately, this is my career, and I faced it head on, and I admitted my mistake, and I went about it and I served my suspension and now I'm back."
However, she questioned whether it should be banned, saying there is "no proof" of its performance-enhancing effects.
"The problem I have with that is there's no proof of what it does, and no one can give you that proof. What is the ban based on?" she said.
It's thought the drug could have a positive effect on an athlete's stamina and endurance.
What else did Maria Sharapova say?
On moving to the US aged six: "It was a crazy journey. I took up the language very fast and I was around kids that spoke English. I never really went to school to study English. I watched Barney and all these little cartoons."
On first watching the Williams sisters: "My father told me, you gotta watch and you gotta study them. And I was like, no, I don't want them to see me studying them! There was a shed behind the court they were practising on, and I watched them through this little peephole."
On equal pay in tennis: "As women athletes we've faced roadblocks. We still face roadblocks, we still face criticism, we still have a long way to go but we keep fighting for it. By our actions on the court and by our professionalism."